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1

Anaerobic adaptation ofParacoccus denitrificans: Sequential formation of denitrification pathway and changes in activity of 5-aminolevulinate synthase and catalase

Igor Kučera, Roman Matyášek, Jiřina Dvořáková, Vladimír Dadák

Journal:

Current Microbiology

Year:

1986

Language:

english

File:

PDF, 369 KB

english, 1986

2

Evidence for a sequence-directed conformation periodicity in the genomic highly repetitive DNA detectable with single-strand-specific chemical probe potassium permanganate

Roman Matyášek, Jaroslav Fulneček, Jiří Fajkus, Milan Bezděk

Journal:

Chromosome Research

Year:

1996

Language:

english

File:

PDF, 1.52 MB

english, 1996

3

Molecular cytogenetic analyses and phylogenetic studies in theNicotianasection Tomentosae

K. Yoong Lim, Roman Matyášek, Conrad P. Lichtenstein, Andrew R. Leitch

Journal:

Year:

2000

Language:

english

File:

PDF, 829 KB

english, 2000

4

Faithful inheritance of cytosine methylation patterns in repeated sequences of the allotetraploid tobacco correlates with the expression of DNA methyltransferase gene families from both parental genomes

Jaroslav Fulneček, Roman Matyášek, Aleš Kovařík

Journal:

Molecular Genetics and Genomics

Year:

2009

Language:

english

File:

PDF, 777 KB

english, 2009

5

Inhibition of SAH-hydrolase activity during seed germination leads to deregulation of flowering genes and altered flower morphology in tobacco

Jaroslav Fulneček, Roman Matyášek, Ivan Votruba, Antonín Holý, Kateřina Křížová, Aleš Kovařík

Journal:

Molecular Genetics and Genomics

Year:

2011

Language:

english

File:

PDF, 635 KB

english, 2011

6

The 5′-terminal phosphates slow migration of single-stranded DNA fragments during electrophoresis in nondenaturing acrylamide gels

Roman Matyášek

Journal:

Analytical Biochemistry

Year:

1992

Language:

english

File:

PDF, 1.08 MB

english, 1992

7

Genome evolution in allotetraploid Nicotiana

KAR YOONG LIM, ROMAN MATYASEK, ALES KOVARIK, ANDREW R. LEITCH

Journal:

Biological Journal of the Linnean Society

Year:

2004

Language:

english

File:

PDF, 423 KB

english, 2004

8

Transcription activity of rRNA genes correlates with a tendency towards intergenomic homogenization in Nicotiana allotetraploids

Martina Dadejová, K. Yoong Lim, Kamila Soucková-Skalická, Roman Matyášek, Marie-Angéle Grandbastien, Andrew Leitch, Aleš Kovařík

Journal:

New Phytologist

Year:

2007

Language:

english

File:

PDF, 321 KB

english, 2007

9

Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years

K. Yoong Lim, Ales Kovarik, Roman Matyasek, Mark W. Chase, James J. Clarkson, M. A. Grandbastien, Andrew R. Leitch

Journal:

New Phytologist

Year:

2007

Language:

english

File:

PDF, 365 KB

english, 2007

10

Fall and rise of satellite repeats in allopolyploids of Nicotiana over c. 5 million years

Blazena Koukalova, Ana Paula Moraes, Simon Renny-Byfield, Roman Matyasek, Andrew Rowland Leitch, Ales Kovarik

Journal:

New Phytologist

Year:

2010

Language:

english

File:

PDF, 564 KB

english, 2010

11

Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing

Roman Matyasek, Jaroslav Fulnecek, Andrew R. Leitch, Ales Kovarik

Journal:

New Phytologist

Year:

2011

Language:

english

File:

PDF, 1.16 MB

english, 2011

12

Comparative genomics and repetitive sequence divergence in the species of diploid Nicotiana section Alatae

K. Yoong Lim, Ales Kovarik, Roman Matyasek, Mark W. Chase, Sandra Knapp, Elizabeth McCarthy, James J. Clarkson, Andrew R. Leitch

Journal:

The Plant Journal

Year:

2006

Language:

english

File:

PDF, 881 KB

english, 2006

13

Similar patterns of rDNA evolution in synthetic and recently formed natural populations ofTragopogon(Asteraceae) allotetraploids

Hana Malinska, Jennifer A Tate, Roman Matyasek, Andrew R Leitch, Douglas E Soltis, Pamela S Soltis, Ales Kovarik

Journal:

BMC Evolutionary Biology

Year:

2010

Language:

english

File:

PDF, 2.04 MB

english, 2010

14

The influence of pH on the kinetics of dissimilatory nitrite reduction in Paracoccus denitrificans

Igor Kučera, Roman Matyášek, Vladimír Dadák

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1986

Language:

english

File:

PDF, 553 KB

english, 1986

15

Cytosine methylation of plastid genome in higher plants. Fact or artefact?

Miloslava Fojtová, Aleš Kovařı́k, Roman Matyášek

Journal:

Year:

2001

Language:

english

File:

PDF, 278 KB

english, 2001

16

Variability in CpNpG methylation in higher plant genomes

Aleš Kovařı́k, Roman Matyášek, Andrew Leitch, Blanka Gazdová, Jaroslav Fulneček, Milan Bezděk

Journal:

Year:

1997

Language:

english

File:

PDF, 529 KB

english, 1997

17

A plant culture (BY-2) widely used in molecular and cell studies is genetically unstable and highly heterogeneous

Ales Kovarik, Kar-Yoong Lim, Kamila Soucková-Skalická, Roman Matyasek, Andrew R. Leitch

Journal:

Botanical Journal of the Linnean Society

Year:

2012

Language:

english

File:

PDF, 928 KB

english, 2012

18

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number inNicotianadiploids

Roman Matyášek, Simon Renny-Byfield, Jaroslav Fulneček, Jiří Macas…

Journal:

Year:

2012

Language:

english

File:

PDF, 668 KB

english, 2012

19

Plant 5S rDNA has multiple alternative nucleosome positions

Fulnecek, Jaroslav, Matyasek, Roman, Kovarik, Ales

Journal:

Year:

2006

File:

PDF, 602 KB

2006

20

Evaluation of DNA bending models in their capacity to predict electrophoretic migration anomalies of satellite DNA sequences

Matyášek, Roman, Fulneček, Jaroslav, Kovařík, Aleš

Journal:

ELECTROPHORESIS

Year:

2013

Language:

english

File:

PDF, 1.56 MB

english, 2013

21

Transcription Activity of rRNA Genes Correlates with a Tendency towards Intergenomic Homogenization in Nicotiana Allotetraploids

Martina Dadejová , K. Yoong Lim, Kamila Soucková-Skalická , Roman Matyášek , Marie-Angéle Grandbastien , Andrew Leitch and Aleš Kovařík

Journal:

New Phytologist

Year:

2007

Language:

english

File:

PDF, 2.42 MB

english, 2007

22

Sequence of Events Leading to Near-Complete Genome Turnover in Allopolyploid Nicotiana within Five Million Years

K. Yoong Lim, Ales Kovarik, Roman Matyasek, Mark W. Chase, James J. Clarkson, M. A. Grandbastien and Andrew R. Leitch

Journal:

New Phytologist

Year:

2007

Language:

english

File:

PDF, 1.82 MB

english, 2007

23

Plant Polyploidy || Fall and rise of satellite repeats in allopolyploids of Nicotiana over c . million years

Blazena Koukalova, Ana Paula Moraes, Simon Renny-Byfield, Roman Matyasek, Andrew Rowland Leitch and Ales Kovarik

Journal:

New Phytologist

Year:

2010

Language:

english

File:

PDF, 2.06 MB

english, 2010

24

Site-Specific Chemical Modification of B-Z Junctions in Supercoiled DNA as Detected by Nuclease SI Digestion, Inhibition of Restriction Cleavage and Nucleotide Sequencing

Nejedlý, Karel, Matyášek, Roman, Paleček, Emil

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1988

Language:

english

File:

PDF, 1.01 MB

english, 1988

25

Rapid Chromosome Evolution in Recently Formed Polyploids in Tragopogon (Asteraceae)

Lim, K. Yoong, Soltis, Douglas E., Soltis, Pamela S., Tate, Jennifer, Matyasek, Roman, Srubarova, Hana, Kovarik, Ales, Pires, J. Chris, Xiong, Zhiyong, Leitch, Andrew R., Hazen, Samuel P.

Journal:

Year:

2008

Language:

english

File:

PDF, 551 KB

english, 2008

26

Rapid Evolution of Parental rDNA in a Synthetic Tobacco Allotetraploid Line

Kamila Skalická , K. Yoong Lim, Roman Matyášek , Blažena Koukalová , Andrew R. Leitch and Ales Kovařík

Journal:

American Journal of Botany

Year:

2003

Language:

english

File:

PDF, 995 KB

english, 2003

27

Molecular Cytogenetic Analysis of Recently Evolved Tragopogon (Asteraceae) Allopolyploids Reveal a Karyotype That Is Additive of the Diploid Progenitors

J. Chris Pires, K. Yoong Lim, Ales Kovarík, Roman Matyásek , Amy Boyd, Andrew R. Leitch, Ilia J. Leitch, Michael D. Bennett, Pamela S. Soltis and Douglas E. Soltis

Journal:

American Journal of Botany

Year:

2004

Language:

english

File:

PDF, 4.23 MB

english, 2004

28

The Origin of Tobacco's T Genome Is Traced to a Particular Lineage within Nicotiana tomentosiformis (Solanaceae)

Lena Murad, K. Yoong Lim, Vangellis Christopodulou, Roman Matyasek, Conrad P. Lichtenstein, Ales Kovarik and Andrew R. Leitch

Journal:

American Journal of Botany

Year:

2002

Language:

english

File:

PDF, 1.18 MB

english, 2002

29

The origin of exon 3 skipping of paternalGLOBOSApre-mRNA in someNicotiana tabacumlines correlates with a point mutation of the very last nucleotide of the exon

Fulneček, Jaroslav, Matyášek, Roman

Journal:

Molecular Genetics and Genomics

Year:

2016

Language:

english

File:

PDF, 2.14 MB

english, 2016

30

Interpopulation hybridization generates meiotically stable rDNA epigenetic variants in allotetraploid Tragopogon mirus

Matyášek, Roman, Dobešová, Eva, Húska, Dalibor, Ježková, Ivana, Soltis, Pamela S., Soltis, Douglas E., Kovařík, Aleš

Journal:

The Plant Journal

Year:

2016

Language:

english

File:

PDF, 958 KB

english, 2016

31

Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing

Roman Matyasek, Jaroslav Fulnecek, Andrew R. Leitch and Ales Kovarik

Journal:

New Phytologist

Year:

2011

Language:

english

File:

PDF, 2.22 MB

english, 2011

32

Ribosomal RNA genes evolution in Tragopogon : A story of New and Old World allotetraploids and the synthetic lines

Malinska, Hana, Tate, Jennifer A., Mavrodiev, Evgeny, Matyasek, Roman, Lim, K. Yoong, Leitch, Andrew R., Soltis, Douglas E., Soltis, Pamela S., Kovarik, Ales

Journal:

Year:

2011

Language:

english

File:

PDF, 964 KB

english, 2011

33

Unique Epigenetic Features of Ribosomal RNA Genes (rDNA) in Early Diverging Plants (Bryophytes)

Matyášek, Roman, Krumpolcová, Alice, Lunerová, Jana, Mikulášková, Eva, Rosselló, Josep A., Kovařík, Aleš

Journal:

Frontiers in Plant Science

Year:

2019

Language:

english

File:

PDF, 2.33 MB

english, 2019